Transcript: ENSDART00000064083.4 otx1-201

Description

orthodenticle homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-400]

Gene Synonyms

cb769, fj99f05, otx1, otx1b, wu:fj99f05, zOtx1

Location

About this transcript

This transcript has 4 exons, is annotated with 33 domains and features, is associated with 86 variant alleles and maps to 461 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064083.4	otx1-201	2513	323aa	ENSDARP00000064082.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q91994	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179858.1	otx1-202	2083	323aa	ENSDARP00000157164.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q91994	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,513 bps, Translation length: 323 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91994

Version

ENSDART00000064083.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.