Transcript: ENSDART00000063857.8 SCRN2-201

Description

secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]

Location

About this transcript

This transcript has 8 exons, is annotated with 4 domains and features, is associated with 750 variant alleles and maps to 189 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063857.8	SCRN2-201	1831	415aa	ENSDARP00000063856.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161314.3	SCRN2-203	4707	415aa	ENSDARP00000131124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYS5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152816.2	SCRN2-202	772	137aa	ENSDARP00000127072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,831 bps, Translation length: 415 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5TYS5

Version

ENSDART00000063857.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.