Transcript: ENSDART00000063800.7 GAPDH-203

Description

glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]

Location

Chromosome 16: 17,192,664-17,197,625 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 143 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000043457.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063800.7	GAPDH-203	1331	333aa	ENSDARP00000063799.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XJ10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000163606.2	GAPDH-206	4585	333aa	ENSDARP00000134592.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XJ10	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147739.3	GAPDH-205	902	223aa	ENSDARP00000118100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000139939.3	GAPDH-204	825	239aa	ENSDARP00000118517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135146.2	GAPDH-202	445	53aa	ENSDARP00000119951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148397.2	GAPDH-201	834	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,331 bps, Translation length: 333 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5XJ10

Version

ENSDART00000063800.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000063800.7 GAPDH-203

Summary

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Transcript: ENSDART00000063800.7 GAPDH-203

Summary

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