Transcript: ENSDART00000063096.6 sypa-202

Description

synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]

Gene Synonyms

syp

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 738 variant alleles and maps to 156 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187860.1	sypa-203	5219	294aa	ENSDARP00000145061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5B9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000063096.6	sypa-202	931	294aa	ENSDARP00000063095.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0S5B9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 931 bps, Translation length: 294 residues

Version

ENSDART00000063096.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.