Transcript: ENSDART00000062978.6 afg1lb-201

Description

AFG1 like ATPase b [Source:ZFIN;Acc:ZDB-GENE-041014-178]

Gene Synonyms

lace1b, si:ch211-278n15.1

Location

About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 718 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062978.6	afg1lb-201	1821	503aa	ENSDARP00000062977.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYS0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153411.3	afg1lb-202	1028	331aa	ENSDARP00000127343.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,821 bps, Translation length: 503 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5TYS0

Version

ENSDART00000062978.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.