Transcript: ENSDART00000062908.5 rpl7l1-201

Description

ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]

Gene Synonyms

wu:fb54e11, zgc:66422

Location

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 345 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062908.5	rpl7l1-201	1032	247aa	ENSDARP00000062907.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PFJ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152890.2	rpl7l1-203	819	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000153230.2	rpl7l1-204	776	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000143627.2	rpl7l1-202	497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,032 bps, Translation length: 247 residues

Version

ENSDART00000062908.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.