Transcript: ENSDART00000062852.3 spcs2-201

Description

signal peptidase complex subunit 2 [Source:NCBI gene;Acc:541342]

Gene Synonyms

wu:fa12g08, zgc:110364

Location

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 359 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142995.3	spcs2-202	1201	201aa	ENSDARP00000113444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9Q0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000062852.3	spcs2-201	1182	201aa	ENSDARP00000062851.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5S9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,182 bps, Translation length: 201 residues

Version

ENSDART00000062852.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.