Transcript: ENSDART00000062441.5 rnaseh1-201

Description

ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]

Gene Synonyms

zgc:91971

Location

Chromosome 20: 30,378,877-30,385,570 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 105 variant alleles and maps to 173 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042571.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062441.5	rnaseh1-201	1281	276aa	ENSDARP00000062440.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169140.3	rnaseh1-204	1117	276aa	ENSDARP00000140924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG94	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148242.4	rnaseh1-202	835	241aa	ENSDARP00000117677.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153019.2	rnaseh1-203	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,281 bps, Translation length: 276 residues

Version

ENSDART00000062441.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000062441.5 rnaseh1-201

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Transcript: ENSDART00000062441.5 rnaseh1-201

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