Transcript: ENSDART00000062363.6 gnat2-201

Description

guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]

Gene Synonyms

GNAT3, Galpha t2, T alpha C, Tc alpha, no optokinetic response f, nof, transducin alpha (cone)

Location

About this transcript

This transcript has 9 exons, is annotated with 25 domains and features, is associated with 8 variant alleles and maps to 254 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062363.6	gnat2-201	2170	354aa	ENSDARP00000062362.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q90WX5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132697.2	gnat2-202	760	179aa	ENSDARP00000113426.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JL40	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146338.2	gnat2-203	630	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,170 bps, Translation length: 354 residues

Version

ENSDART00000062363.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.