Transcript: ENSDART00000062350.6 katnbl1-201

Description

katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]

Gene Synonyms

fc76b10, si:ch211-150c22.2, wu:fc76b10, zgc:103491

Location

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 237 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000062350.6	katnbl1-201	1618	305aa	ENSDARP00000062349.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153016.2	katnbl1-204	764	157aa	ENSDARP00000127462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152949.3	katnbl1-203	715	141aa	ENSDARP00000127307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141252.3	katnbl1-202	645	195aa	ENSDARP00000115799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,618 bps, Translation length: 305 residues

Version

ENSDART00000062350.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.