Transcript: ENSDART00000062292.7 ATF2-203

Description

activating transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030911-8]

Location

Chromosome 9: 2,343,096-2,382,588 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 30 domains and features, is associated with 682 variant alleles and maps to 89 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000023903.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000191722.1	ATF2-202	1662	515aa	ENSDARP00000145716.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000062292.7	ATF2-203	1581	488aa	ENSDARP00000062291.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIZ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000135180.3	ATF2-201	429	130aa	ENSDARP00000116406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,581 bps, Translation length: 488 residues

Version

ENSDART00000062292.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000062292.7 ATF2-203

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Transcript: ENSDART00000062292.7 ATF2-203

Summary

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