Transcript: ENSDART00000062061.5 cdca4-201

Description

cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]

Gene Synonyms

fb78b08, si:dkey-177p2.7, wu:fb78b08, zgc:92217

Location

Chromosome 20: 26,939,811-26,944,883 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 158 variant alleles and maps to 223 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042319.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152992.2	cdca4-205	2391	286aa	ENSDARP00000127309.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NH38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138369.3	cdca4-202	1411	286aa	ENSDARP00000123471.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NH38	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190888.1	cdca4-207	1021	293aa	ENSDARP00000154777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000062061.5	cdca4-201	985	283aa	ENSDARP00000062060.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153215.2	cdca4-206	760	154aa	ENSDARP00000127235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138987.3	cdca4-203	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000146057.2	cdca4-204	311	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 985 bps, Translation length: 283 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000062061.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000062061.5 cdca4-201

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Transcript: ENSDART00000062061.5 cdca4-201

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