Transcript: ENSDART00000061261.4 gja1b-201

Description

gap junction protein alpha 1b [Source:ZFIN;Acc:ZDB-GENE-991105-4]

Gene Synonyms

cx43, cx43a1, etID309742.9, gja1, shf, short fin, sof, stopsel, stp, zfCx43.3

Location

About this transcript

This transcript has 2 exons, is annotated with 42 domains and features, is associated with 65 variant alleles and maps to 275 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061261.4	gja1b-201	2917	381aa	ENSDARP00000061260.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O57474-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138569.2	gja1b-202	2806	341aa	ENSDARP00000114698.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000181663.1	gja1b-204	1026	341aa	ENSDARP00000150086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000153151.2	gja1b-203	913	141aa	ENSDARP00000127342.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,917 bps, Translation length: 381 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O57474

Version

ENSDART00000061261.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.