Transcript: ENSDART00000061173.5 hsdl1-201

Description

hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]

Gene Synonyms

si:ch211-172b19.1, zgc:103498

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 1 variant allele and maps to 141 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061173.5	hsdl1-201	1580	319aa	ENSDARP00000061172.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WWC6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152938.3	hsdl1-202	816	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153399.3	hsdl1-204	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153002.2	hsdl1-203	789	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,580 bps, Translation length: 319 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A5WWC6

Version

ENSDART00000061173.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.