Transcript: ENSDART00000060458.8 si:dkey-241l7.3-201

Description

si:dkey-241l7.3 [Source:ZFIN;Acc:ZDB-GENE-041014-239]

Location

Chromosome 20: 54,027,778-54,029,122 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 17 variant alleles and maps to 265 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000086956.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060458.8	si:dkey-241l7.3-201	765	153aa	ENSDARP00000060457.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152961.2	si:dkey-241l7.3-202	610	153aa	ENSDARP00000127264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG08	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153400.3	si:dkey-241l7.3-203	580	153aa	ENSDARP00000127402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG08	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 765 bps, Translation length: 153 residues

Version

ENSDART00000060458.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000060458.8 si:dkey-241l7.3-201

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Transcript: ENSDART00000060458.8 si:dkey-241l7.3-201

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