Transcript: ENSDART00000060125.6 or40a1-201

Description

odorant receptor, family 40, subfamily A, member 1 [Source:ZFIN;Acc:ZDB-GENE-010308-21]

Gene Synonyms

Dr3OR15.30, ZF1A, fZOR9, or107-1, or15.39, or7.1, or9, orzf1a, zor9

Location

Chromosome 15: 31,344,487-31,345,885 forward strand.

About this transcript

This transcript has 1 exon, is annotated with 44 domains and features, is associated with 178 variant alleles and maps to 264 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000041032.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000060125.6	or40a1-201	1399	379aa	ENSDARP00000060124.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000159182.2	or40a1-203	1376	331aa	ENSDARP00000131218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2PRD4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000146695.2	or40a1-202	1050	331aa	ENSDARP00000116654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2PRD4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 1,399 bps, Translation length: 379 residues

Version

ENSDART00000060125.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000060125.6 or40a1-201

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Transcript: ENSDART00000060125.6 or40a1-201

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