Transcript: ENSDART00000060054.7 itgbl1-201

Description

integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]

Gene Synonyms

zgc:112304

Location

About this transcript

This transcript has 8 exons, is annotated with 36 domains and features, is associated with 737 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000060054.7	itgbl1-201	1411	406aa	ENSDARP00000060053.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139584.2	itgbl1-202	1256	186aa	ENSDARP00000112560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,411 bps, Translation length: 406 residues

Version

ENSDART00000060054.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.