Transcript: ENSDART00000059497.7 olfcx1-201

Description

olfactory receptor C family, x1 [Source:ZFIN;Acc:ZDB-GENE-050419-84]

Gene Synonyms

C01, Dr13-1, si:ch211-229c8.1, sub 13_3, v2rc1

Location

Chromosome 18: 33,185,819-33,241,437 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 59 domains and features, is associated with 194 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000094735.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000193409.1	olfcx1-205	5071	881aa	ENSDARP00000145651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000059497.7	olfcx1-201	3589	881aa	ENSDARP00000059496.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000179868.1	olfcx1-203	3589	881aa	ENSDARP00000150359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000191151.1	olfcx1-204	3287	819aa	ENSDARP00000152908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000147225.2	olfcx1-202	2461	815aa	ENSDARP00000120203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,589 bps, Translation length: 881 residues

Version

ENSDART00000059497.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000059497.7 olfcx1-201

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Transcript: ENSDART00000059497.7 olfcx1-201

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