Transcript: ENSDART00000059438.6 rtf2-201

Description

replication termination factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4825]

Gene Synonyms

rtfdc1, wu:fd99e08, zgc:55448, zgc:86650

Location

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 1072 variant alleles and maps to 154 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059438.6	rtf2-201	1785	310aa	ENSDARP00000059437.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000169747.3	rtf2-205	3704	309aa	ENSDARP00000139044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IT16	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157040.2	rtf2-204	771	207aa	ENSDARP00000128839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000156446.2	rtf2-203	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000154406.2	rtf2-202	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,785 bps, Translation length: 310 residues

Version

ENSDART00000059438.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.