Transcript: ENSDART00000059252.5 GSDME-201

Description

gasdermin Eb [Source:ZFIN;Acc:ZDB-GENE-030131-7662]

Location

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 73 variant alleles and maps to 295 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059252.5	GSDME-201	2369	472aa	ENSDARP00000059251.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6J2R6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182869.1	GSDME-203	1977	472aa	ENSDARP00000146497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6J2R6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137951.2	GSDME-202	434	106aa	ENSDARP00000123662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,369 bps, Translation length: 472 residues

Version

ENSDART00000059252.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.