Transcript: ENSDART00000058987.7 kcnj1a.1-201

Description

potassium inwardly rectifying channel subfamily J member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]

Gene Synonyms

kcnj1, kir1.1, romk2, wu:fl37c05, zgc:63534

Location

Chromosome 18: 48,542,900-48,558,420 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 28 domains and features, is associated with 623 variant alleles and maps to 288 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000091232.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058987.7	kcnj1a.1-201	1816	370aa	ENSDARP00000058986.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8I4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145189.2	kcnj1a.1-203	1634	370aa	ENSDARP00000113653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8I4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138607.3	kcnj1a.1-202	1601	370aa	ENSDARP00000123561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8I4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,816 bps, Translation length: 370 residues

Version

ENSDART00000058987.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000058987.7 kcnj1a.1-201

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Transcript: ENSDART00000058987.7 kcnj1a.1-201

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