Transcript: ENSDART00000058685.7 zfpm2a-201

Description

zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]

Gene Synonyms

fog2a, zgc:152696

Location

Chromosome 16: 43,818,897-44,127,326 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 44 domains and features, is associated with 2436 variant alleles and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040123.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058685.7	zfpm2a-201	4564	1142aa	ENSDARP00000058684.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4T3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000141941.5	zfpm2a-203	4142	1041aa	ENSDARP00000112530.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RD49	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000190830.1	zfpm2a-205	4007	1141aa	ENSDARP00000155171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QQG2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000104583.5	zfpm2a-202	1126	195aa	ENSDARP00000095355.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMB8	-
ENSDART00000151936.2	zfpm2a-204	402	100aa	ENSDARP00000126387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DY60	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 4,564 bps, Translation length: 1,142 residues

Version

ENSDART00000058685.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000058685.7 zfpm2a-201

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Transcript: ENSDART00000058685.7 zfpm2a-201

Summary

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