Transcript: ENSDART00000058666.6 PI4KB-201

Description

phosphatidylinositol 4-kinase, catalytic, beta [Source:ZFIN;Acc:ZDB-GENE-061013-96]

Location

Chromosome 16: 38,159,758-38,199,760 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 966 variant alleles and maps to 342 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040111.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058666.6	PI4KB-201	4300	835aa	ENSDARP00000058665.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q49GP3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000160332.2	PI4KB-204	4940	835aa	ENSDARP00000130423.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q49GP3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000112165.3	PI4KB-203	3292	850aa	ENSDARP00000099330.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBR8	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000111796.4	PI4KB-202	614	205aa	ENSDARP00000098376.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,300 bps, Translation length: 835 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q49GP3

Version

ENSDART00000058666.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000058666.6 PI4KB-201

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Transcript: ENSDART00000058666.6 PI4KB-201

Summary

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