Transcript: ENSDART00000058613.6 fli1rs-201

Description

Fli-1 proto-onco, ETS transcription factor-related sequence [Source:ZFIN;Acc:ZDB-GENE-031114-3]

Gene Synonyms

fli1b, zgc:5777174

Location

Chromosome 16: 42,018,367-42,046,881 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 24 domains and features, is associated with 437 variant alleles and maps to 196 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040080.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000058613.6	fli1rs-201	2704	467aa	ENSDARP00000058612.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000102789.4	fli1rs-202	2782	458aa	ENSDARP00000093564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000134010.3	fli1rs-203	2781	457aa	ENSDARP00000122384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,704 bps, Translation length: 467 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000058613.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000058613.6 fli1rs-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000058613.6 fli1rs-201

Summary

About Us

Get help

Our sister sites

Follow us