Transcript: ENSDART00000058306.7 lifrb-201

Description

LIF receptor subunit alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]

Gene Synonyms

si:dkey-120e24.3

Location

Chromosome 21: 21,244,046-21,261,636 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 32 domains and features, is associated with 631 variant alleles and maps to 100 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039863.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058306.7	lifrb-201	4025	960aa	ENSDARP00000058305.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5F5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000189665.1	lifrb-203	3116	956aa	ENSDARP00000154113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000131890.2	lifrb-202	3101	951aa	ENSDARP00000122803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 4,025 bps, Translation length: 960 residues

Version

ENSDART00000058306.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000058306.7 lifrb-201

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Transcript: ENSDART00000058306.7 lifrb-201

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