Transcript: ENSDART00000057867.5 sfxn3-201

Description

sideroflexin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2092]

Gene Synonyms

zgc:158660

Location

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 374 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057867.5	sfxn3-201	1576	322aa	ENSDARP00000057866.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JJ32	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176809.2	sfxn3-202	1333	322aa	ENSDARP00000144461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8JJ32	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,576 bps, Translation length: 322 residues

Version

ENSDART00000057867.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.