Transcript: ENSDART00000057710.6 ccdc85a-201

Description

coiled-coil domain containing 85A [Source:ZFIN;Acc:ZDB-GENE-080220-55]

Gene Synonyms

zgc:175167

Location

About this transcript

This transcript has 4 exons, is associated with 761 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146712.2	ccdc85a-202	2021	421aa	ENSDARP00000116404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5P4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000057710.6	ccdc85a-201	2519	408aa	ENSDARP00000057709.5	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 2,519 bps, Translation length: 408 residues

Version

ENSDART00000057710.6

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.