Transcript: ENSDART00000057686.5 calhm2.1-201

Description

calcium homeostasis modulator family member 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030616-561]

Gene Synonyms

calhm2, fam26b, loc51063, si:packtrz.5, si:xx-packtrz.5, wu:fj22g12, zgc:91906

Location

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 118 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057686.5	calhm2.1-201	2180	310aa	ENSDARP00000057685.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158093.3	calhm2.1-202	5153	310aa	ENSDARP00000131715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBR8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,180 bps, Translation length: 310 residues

Version

ENSDART00000057686.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.