Transcript: ENSDART00000057507.4 ssbp1-201

Description

single-stranded DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-340]

Gene Synonyms

zgc:110325

Location

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 274 variant alleles and maps to 205 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057507.4	ssbp1-201	1037	146aa	ENSDARP00000057506.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5I7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193929.1	ssbp1-202	441	146aa	ENSDARP00000157021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5I7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,037 bps, Translation length: 146 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B8A5I7

Version

ENSDART00000057507.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.