Transcript: ENSDART00000057469.6 vstm4a-201

Description

V-set and transmembrane domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-060810-69]

Gene Synonyms

im:7157049, zgc:162468

Location

About this transcript

This transcript has 8 exons, is annotated with 20 domains and features, is associated with 373 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057469.6	vstm4a-201	1448	329aa	ENSDARP00000057468.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NCH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162254.2	vstm4a-203	1368	161aa	ENSDARP00000136611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000114007.4	vstm4a-202	1451	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,448 bps, Translation length: 329 residues

Version

ENSDART00000057469.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.