Transcript: ENSDART00000057423.8 terfa-201

Description

telomeric repeat binding factor a [Source:ZFIN;Acc:ZDB-GENE-020419-38]

Gene Synonyms

CHUNP6903, wu:fi15d05, wu:fi22b03, zgc:111909, zgc:114011

Location

Chromosome 4: 77,973,876-77,996,958 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 26 domains and features, is associated with 486 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039302.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000057423.8	terfa-201	2041	574aa	ENSDARP00000057422.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122459.3	terfa-202	1725	574aa	ENSDARP00000105024.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRC8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174108.2	terfa-204	1130	353aa	ENSDARP00000143123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174392.2	terfa-206	931	310aa	ENSDARP00000143229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000174118.2	terfa-205	556	141aa	ENSDARP00000143188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000155022.2	terfa-203	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,041 bps, Translation length: 574 residues

Version

ENSDART00000057423.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000057423.8 terfa-201

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Transcript: ENSDART00000057423.8 terfa-201

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