Transcript: ENSDART00000056846.8 ppp1r1c-201

Description

protein phosphatase 1, regulatory (inhibitor) subunit 1C [Source:ZFIN;Acc:ZDB-GENE-040718-273]

Gene Synonyms

fk97a08, wu:fk97a08, zgc:92796

Location

Chromosome 9: 44,430,974-44,486,087 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 19 variant alleles and maps to 90 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038941.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056846.8	ppp1r1c-201	1109	171aa	ENSDARP00000056845.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190696.1	ppp1r1c-204	2630	171aa	ENSDARP00000153077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149726.2	ppp1r1c-202	1237	165aa	ENSDARP00000124964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5V3	-
ENSDART00000150119.2	ppp1r1c-203	501	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,109 bps, Translation length: 171 residues

Version

ENSDART00000056846.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000056846.8 ppp1r1c-201

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Transcript: ENSDART00000056846.8 ppp1r1c-201

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