Transcript: ENSDART00000056417.5 ftr30-201

Description

finTRIM family, member 30 [Source:ZFIN;Acc:ZDB-GENE-070912-106]

Gene Synonyms

TRIM25L, si:ch211-150h8.4

Location

Chromosome 2: 59,202,755-59,205,393 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 21 variant alleles and maps to 252 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000095448.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000141876.2	ftr30-202	1561	508aa	ENSDARP00000119418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000056417.5	ftr30-201	750	249aa	ENSDARP00000056416.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000182452.1	ftr30-203	735	244aa	ENSDARP00000146322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 750 bps, Translation length: 249 residues

Version

ENSDART00000056417.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000056417.5 ftr30-201

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Transcript: ENSDART00000056417.5 ftr30-201

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