Transcript: ENSDART00000055857.7 ckmt2b-202

Description

creatine kinase, mitochondrial 2b (sarcomeric) [Source:ZFIN;Acc:ZDB-GENE-040426-1654]

Gene Synonyms

ckmt2, zgc:73059

Location

Chromosome 5: 51,594,284-51,602,505 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 138 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000039929.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000058403.8	ckmt2b-203	1445	413aa	ENSDARP00000058402.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E5J9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000184797.1	ckmt2b-205	1618	413aa	ENSDARP00000148692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E5J9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000048210.5	ckmt2b-201	1378	413aa	ENSDARP00000048209.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000164668.2	ckmt2b-204	883	246aa	ENSDARP00000136115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000055857.7	ckmt2b-202	784	237aa	ENSDARP00000055856.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 784 bps, Translation length: 237 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000055857.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000055857.7 ckmt2b-202

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Transcript: ENSDART00000055857.7 ckmt2b-202

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