Transcript: ENSDART00000055845.7 thoc5-201

Description

THO complex 5 [Source:NCBI gene;Acc:325064]

Gene Synonyms

fc54b09, wu:fc54b09, zgc:56190, zgc:76912

Location

Chromosome 25: 3,759,675-3,785,566 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 8 domains and features, is associated with 760 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038290.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055845.7	thoc5-201	2348	684aa	ENSDARP00000055844.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RB69	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000180601.1	thoc5-204	4188	705aa	ENSDARP00000157356.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QR48	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000157050.3	thoc5-203	872	255aa	ENSDARP00000128311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDL2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153905.2	thoc5-202	677	194aa	ENSDARP00000127659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBR7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,348 bps, Translation length: 684 residues

Version

ENSDART00000055845.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000055845.7 thoc5-201

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Transcript: ENSDART00000055845.7 thoc5-201

Summary

About Us

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