Transcript: ENSDART00000055766.6 zgc:113333-201

Description

zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]

Gene Synonyms

si:ch211-173k16.6

Location

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 370 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000055766.6	zgc:113333-201	1988	471aa	ENSDARP00000055765.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145539.2	zgc:113333-203	953	156aa	ENSDARP00000117020.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145277.2	zgc:113333-202	904	254aa	ENSDARP00000119075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,988 bps, Translation length: 471 residues

Version

ENSDART00000055766.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.