Transcript: ENSDART00000055607.7 pdgfbb-201

Description

platelet-derived growth factor beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-131121-332]

Gene Synonyms

sb:eu2436, si:dkey-110g7.5

Location

Chromosome 3: 24,275,766-24,296,514 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 36 variant alleles and maps to 133 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038139.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000183926.1	pdgfbb-203	7212	483aa	ENSDARP00000146623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q0D8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000169765.2	pdgfbb-202	4898	483aa	ENSDARP00000130601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q0D8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000055607.7	pdgfbb-201	3821	482aa	ENSDARP00000055606.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FBB3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,821 bps, Translation length: 482 residues

Version

ENSDART00000055607.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000055607.7 pdgfbb-201

Summary

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Transcript: ENSDART00000055607.7 pdgfbb-201

Summary

About Us

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