Transcript: ENSDART00000055504.6 cyc1-201

Description

cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]

Gene Synonyms

fb80h03, im:6911272, sr:nyz104, wu:fb80h03, zgc:123089

Location

Chromosome 6: 50,381,347-50,390,089 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 28 domains and features, is associated with 254 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038075.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055504.6	cyc1-201	1591	307aa	ENSDARP00000055503.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3B7R0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141128.2	cyc1-203	486	131aa	ENSDARP00000116291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145555.2	cyc1-204	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137519.3	cyc1-202	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151401.3	cyc1-205	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,591 bps, Translation length: 307 residues

Version

ENSDART00000055504.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000055504.6 cyc1-201

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Transcript: ENSDART00000055504.6 cyc1-201

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