Transcript: ENSDART00000055443.7 tpk1-201

Description

thiamin pyrophosphokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-176]

Gene Synonyms

zgc:101685

Location

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 1135 variant alleles and maps to 175 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055443.7	tpk1-201	1964	257aa	ENSDARP00000055442.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBJ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172056.3	tpk1-203	778	257aa	ENSDARP00000139082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBJ9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140994.2	tpk1-202	562	151aa	ENSDARP00000119680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,964 bps, Translation length: 257 residues

Version

ENSDART00000055443.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.