Transcript: ENSDART00000055194.6 actb2-201

Description

actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]

Gene Synonyms

bact2, bactin2, fa56g06, fb38a10, wu:fa56g06, wu:fb38a10

Location

Chromosome 3: 40,526,107-40,529,782 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 49 domains and features, is associated with 342 variant alleles and maps to 1184 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037870.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141737.3	actb2-206	1789	375aa	ENSDARP00000122263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WG05 Q7ZVF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000055194.6	actb2-201	1762	375aa	ENSDARP00000055193.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WG05 Q7ZVF9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193047.1	actb2-208	1145	375aa	ENSDARP00000147775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WG05 Q7ZVF9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148290.2	actb2-207	1118	128aa	ENSDARP00000120388.1	Nonsense mediated decay	-	-
ENSDART00000134020.3	actb2-203	730	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000135971.3	actb2-205	867	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134924.2	actb2-204	857	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132497.3	actb2-202	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,762 bps, Translation length: 375 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7ZVF9

Version

ENSDART00000055194.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000055194.6 actb2-201

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Transcript: ENSDART00000055194.6 actb2-201

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