Transcript: ENSDART00000055161.5 cox6b2-201

Description

cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]

Location

Chromosome 16: 12,505,216-12,512,568 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 330 variant alleles and maps to 83 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037860.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160906.3	cox6b2-204	553	86aa	ENSDARP00000140452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000055161.5	cox6b2-201	550	86aa	ENSDARP00000055160.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXM1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155829.2	cox6b2-202	899	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000156223.2	cox6b2-203	845	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 550 bps, Translation length: 86 residues

Version

ENSDART00000055161.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000055161.5 cox6b2-201

Summary

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Transcript: ENSDART00000055161.5 cox6b2-201

Summary

About Us

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