Transcript: ENSDART00000055148.6 zgc:101663-201

Description

zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]

Location

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 428 variant alleles and maps to 136 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055148.6	zgc:101663-201	2425	454aa	ENSDARP00000055147.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114000.4	zgc:101663-202	5064	454aa	ENSDARP00000101204.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3T0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,425 bps, Translation length: 454 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5U3T0

Version

ENSDART00000055148.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.