Transcript: ENSDART00000055068.5 pvalb5-201

Description

parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]

Gene Synonyms

fj09c11, wu:fj09c11, wu:fj30d06, zgc:109703

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 1213 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055068.5	pvalb5-201	767	108aa	ENSDARP00000055067.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q804V9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182630.1	pvalb5-203	1261	108aa	ENSDARP00000150078.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q804V9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133091.2	pvalb5-202	818	122aa	ENSDARP00000114656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 767 bps, Translation length: 108 residues

Version

ENSDART00000055068.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.