Transcript: ENSDART00000054891.5 pcdh2ab2-201

Description

protocadherin 2 alpha b2 [Source:ZFIN;Acc:ZDB-GENE-041118-2]

Gene Synonyms

DrPcdh2a27, pcdh2a27

Location

About this transcript

This transcript has 4 exons, is annotated with 67 domains and features, is associated with 1131 variant alleles and maps to 297 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054891.5	pcdh2ab2-201	3033	944aa	ENSDARP00000054890.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N3N1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183268.1	pcdh2ab2-202	780	193aa	ENSDARP00000147288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,033 bps, Translation length: 944 residues

Version

ENSDART00000054891.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.