Transcript: ENSDART00000054833.6 rgs11-201

Description

regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]

Gene Synonyms

zgc:171922

Location

About this transcript

This transcript has 16 exons, is annotated with 1 domain and feature, is associated with 519 variant alleles and maps to 103 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135702.3	rgs11-202	1449	471aa	ENSDARP00000113154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5L7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000054833.6	rgs11-201	1695	359aa	ENSDARP00000054832.5	Nonsense mediated decay	F1RDB2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 1,695 bps, Translation length: 359 residues

Version

ENSDART00000054833.6

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.