Transcript: ENSDART00000054735.7 synpra-201

Description

synaptoporin a [Source:ZFIN;Acc:ZDB-GENE-141212-294]

Gene Synonyms

si:dkey-30j16.3

Location

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 1802 variant alleles and maps to 120 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054735.7	synpra-201	4250	288aa	ENSDARP00000054734.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FGY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185715.1	synpra-203	5683	264aa	ENSDARP00000157098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165595.2	synpra-202	5641	268aa	ENSDARP00000138688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PVE4	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,250 bps, Translation length: 288 residues

Version

ENSDART00000054735.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]