Transcript: ENSDART00000054707.7 tusc3-201

Description

tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]

Gene Synonyms

unm_sa1726, zgc:110044

Location

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 975 variant alleles and maps to 282 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160270.2	tusc3-203	1135	300aa	ENSDARP00000137399.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503W5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122503.3	tusc3-202	903	300aa	ENSDARP00000110152.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503W5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000054707.7	tusc3-201	727	205aa	ENSDARP00000054706.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 727 bps, Translation length: 205 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000054707.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.