Transcript: ENSDART00000054420.5 rad9a-201

Description

RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]

Gene Synonyms

zgc:56197, zgc:85638

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 271 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054420.5	rad9a-201	1702	381aa	ENSDARP00000054419.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2Z4U5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125274.3	rad9a-202	805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,702 bps, Translation length: 381 residues

Version

ENSDART00000054420.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.