Transcript: ENSDART00000054266.5 gnpda1-201

Description

glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]

Gene Synonyms

zgc:110691

Location

Chromosome 14: 23,709,212-23,713,703 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 281 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000037307.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136909.2	gnpda1-203	955	275aa	ENSDARP00000116667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000191162.1	gnpda1-205	3137	269aa	ENSDARP00000156609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q567X3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179754.1	gnpda1-204	2852	275aa	ENSDARP00000157403.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000054266.5	gnpda1-201	1043	269aa	ENSDARP00000054265.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q567X3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131287.2	gnpda1-202	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,043 bps, Translation length: 269 residues

Version

ENSDART00000054266.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000054266.5 gnpda1-201

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Transcript: ENSDART00000054266.5 gnpda1-201

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