Transcript: ENSDART00000053946.4 cxcl12a-201

Description

chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]

Gene Synonyms

SDF-1, cxcl12, sdf-1a, sdf1a, unm t30516, unm_t30516, wu:fa55e10, wu:fc16h12, wu:fj84c02

Location

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 450 variant alleles and maps to 360 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053946.4	cxcl12a-201	3041	99aa	ENSDARP00000053945.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8AV10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,041 bps, Translation length: 99 residues

Version

ENSDART00000053946.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.